Intrinsic conformational dynamics of the HIV-1 genomic RNA 5′UTR
نویسندگان
چکیده
منابع مشابه
On the Selective Packaging of Genomic RNA by HIV-1
Like other retroviruses, human immunodeficiency virus type 1 (HIV-1) selectively packages genomic RNA (gRNA) during virus assembly. However, in the absence of the gRNA, cellular messenger RNAs (mRNAs) are packaged. While the gRNA is selected because of its cis-acting packaging signal, the mechanism of this selection is not understood. The affinity of Gag (the viral structural protein) for cellu...
متن کاملتوسعه روش NASBA-ELISA برای تشخیص HIV-1 RNA
چکید ه سابقه و هدف با شروع عفونت HIV-1 ، اولین مارکری که در خون آشکار می‌شود، RNA ویروسی می‌باشد. از میان روش‌های موجود که شناسایی RNA را هدف قرار می‌دهند؛ متداول‌ترین روش‌ها NASBA و RT-PCR هستند. NASBA مزیت‌های متعددی نسبت به RT-PCR ارایه می‌کند. در این پژوهش، واکنش NASBA در ترکیب با روش آشکارسازی آسان و حساس الایزا، برای تشخیص و آشکارسازی HIV-1 RNA مورد استفاده قرار گرفت. مواد و روش‌ه...
متن کاملStructure and Dynamics of the HIV-1 Frameshift Element RNA
The HIV-1 ribosomal frameshift element is highly structured, regulates translation of all virally encoded enzymes, and is a promising therapeutic target. The prior model for this motif contains two helices separated by a three-nucleotide bulge. Modifications to this model were suggested by SHAPE chemical probing of an entire HIV-1 RNA genome. Novel features of the SHAPE-directed model include a...
متن کاملDifferent effects of the TAR structure on HIV-1 and HIV-2 genomic RNA translation
The 5'-untranslated region (5'-UTR) of the genomic RNA of human immunodeficiency viruses type-1 (HIV-1) and type-2 (HIV-2) is composed of highly structured RNA motifs essential for viral replication that are expected to interfere with Gag and Gag-Pol translation. Here, we have analyzed and compared the properties by which the viral 5'-UTR drives translation from the genomic RNA of both human im...
متن کاملExploring Conformational Space and Dynamics of RNA Hairpins by MD Simulations: Structure-Function Correlation of HIV-1 Genome Regulatory Elements
c © 2007 by John von Neumann Institute for Computing Permission to make digital or hard copies of portions of this work for personal or classroom use is granted provided that the copies are not made or distributed for profit or commercial advantage and that copies bear this notice and the full citation on the first page. To copy otherwise requires prior specific permission by the publisher ment...
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ژورنال
عنوان ژورنال: Proceedings of the National Academy of Sciences
سال: 2019
ISSN: 0027-8424,1091-6490
DOI: 10.1073/pnas.1902271116